DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: GRF zinc finger.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Brafl1|82922|fgenesh2_pg.scaffold_116000028 External link bf SF
  bf PF
ENSMLUP00000006896 External link l2 SF
  l2 PF
ENSTRUP00000040592 External link to SF
  to PF
ENSTRUP00000040590 External link to SF
  to PF
ENSORLP00000025238 External link ol SF
  ol PF
ENSTRUP00000040591 External link to SF
  to PF
ENSMLUP00000006896 External link lu SF
  lu PF
ENSDARP00000008228 External link df SF
  df PF
ENSTRUP00000040590 External link tq SF
  tq PF
ENSORLP00000025238 External link o1 SF
  o1 PF
ENSDARP00000008228 External link da SF
  da PF
ENSOCUP00000000900 External link ok SF
  ok PF
ENSBTAP00000007661 External link bv SF
  bv PF
ENSGALP00000037417 External link gg SF
  gg PF
ENSPTRP00000028509 External link xp SF
  xp PF
ENSRNOP00000015623 External link ro SF
  ro PF
106764 External link tl SF
  tl PF
ENSGALP00000017422 External link gh SF
  gh PF
ENSOCUP00000000900 External link o3 SF
  o3 PF
jgi|Brafl1|235681|e_gw.326.4.1 External link bf SF
  bf PF
ENSECAP00000007116 External link e5 SF
  e5 PF
ENSMUSP00000041909 External link mm SF
Gene name: Neil3  mm PF
ENSP00000264596 External link hs SF
Gene name: NEIL3  hs PF
ENSETEP00000007725 External link e3 SF
  e3 PF
ENSCAFP00000012342 External link di SF
  di PF
ENSMUSP00000041909 External link mh SF
Gene name: Neil3  mh PF
ENSMODP00000004671 External link op SF
  op PF
ENSBTAP00000007661 External link bw SF
  bw PF
ENSMICP00000008327 External link io SF
  io PF
ENSRNOP00000015623 External link rn SF
  rn PF
ENSPTRP00000028509 External link xq SF
  xq PF
ENSMICP00000008327 External link i2 SF
  i2 PF
ENSMMUP00000009704 External link r2 SF
  r2 PF
ENSGALP00000017422 External link gg SF
  gg PF
ENSP00000264596 External link ht SF
Gene name: NEIL3  ht PF
ENSGACP00000021851 External link gc SF
  gc PF
ENSFCAP00000004585 External link f1 SF
  f1 PF
ENSFCAP00000004585 External link fe SF
  fe PF
ENSETEP00000007725 External link ee SF
  ee PF
ENSMMUP00000009704 External link ru SF
  ru PF
ENSMODP00000004671 External link oo SF
  oo PF
ENSCAFP00000012342 External link dg SF
  dg PF
ENSECAP00000007116 External link eq SF
  eq PF
ENSGACP00000021851 External link g1 SF
  g1 PF
jgi|Lotgi1|174963|fgenesh2_pg.C_sca_229000004 External link gy SF
  gy PF
jgi|MicpuN2|64832|EuGene.1600010193 External link ij SF
  ij PF
AT3G42860.1 External link at SF
  at PF
AT3G42860.1 External link ad SF
  ad PF
jgi|ChlNC64A_1|137653|IGS.gm_2_00120 External link h2 SF
  h2 PF
jgi|Sorbi1|5028199|Sb01g005940 External link oj SF
  oj PF