DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: GcrA cell cycle regulator.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|148255966|ref|YP_001240551.1| External link 42 SF
  42 PF
gi|146341168|ref|YP_001206216.1| External link 26 SF
  26 PF
gi|27380093|ref|NP_771622.1| External link bj SF
  bj PF
gi|116495403|ref|YP_807137.1| External link 1o SF
  1o PF
gi|191638096|ref|YP_001987262.1| External link 95 SF
  95 PF
gi|114799479|ref|YP_761733.1| External link 54 SF
  54 PF
gi|15897384|ref|NP_341989.1| External link ss SF
  ss PF
gi|163842584|ref|YP_001626988.1| External link 6g SF No hits
  6g PF
gi|92116260|ref|YP_575989.1| External link nb SF No hits
  nb PF
gi|146343544|ref|YP_001208592.1| External link 26 SF No hits
  26 PF
gi|110632372|ref|YP_672580.1| External link 0p SF No hits
  0p PF
gi|163867404|ref|YP_001608599.1| External link 6u SF No hits
  6u PF
gi|148257096|ref|YP_001241681.1| External link 42 SF No hits
  42 PF
gi|150395354|ref|YP_001325821.1| External link 2m SF No hits
  2m PF
gi|16126484|ref|NP_421048.1| External link cc SF No hits
  cc PF
gi|126461488|ref|YP_001042602.1| External link 21 SF No hits
  21 PF
gi|110678978|ref|YP_681985.1| External link 2r SF No hits
  2r PF
gi|170749762|ref|YP_001756022.1| External link 7w SF No hits
  7w PF
gi|189023546|ref|YP_001934314.1| External link 91 SF No hits
  91 PF
gi|86356169|ref|YP_468061.1| External link rz SF No hits
  rz PF
gi|167645193|ref|YP_001682856.1| External link 7o SF No hits
  7o PF
gi|170744714|ref|YP_001773369.1| External link 7s SF No hits
  7s PF
gi|82699223|ref|YP_413797.1| External link by SF No hits
  by PF
gi|114328926|ref|YP_746083.1| External link 3m SF No hits
  3m PF
gi|85373538|ref|YP_457600.1| External link ey SF No hits
  ey PF
gi|154245165|ref|YP_001416123.1| External link 2d SF No hits
  2d PF
gi|167647037|ref|YP_001684700.1| External link 7o SF No hits
  7o PF
gi|39937832|ref|NP_950108.1| External link rd SF No hits
  rd PF
gi|103486583|ref|YP_616144.1| External link ak SF No hits
  ak PF
gi|27376208|ref|NP_767737.1| External link bj SF No hits
  bj PF
gi|191637393|ref|YP_001986559.1| External link 95 SF No hits
  95 PF
gi|71083206|ref|YP_265925.1| External link ub SF No hits
  ub PF
gi|115526873|ref|YP_783784.1| External link 5k SF No hits
  5k PF
gi|148557474|ref|YP_001265056.1| External link 2i SF No hits
  2i PF
gi|83592991|ref|YP_426743.1| External link rb SF No hits
  rb PF
gi|23501206|ref|NP_697333.1| External link br SF No hits
  br PF
gi|56695858|ref|YP_166209.1| External link sg SF No hits
  sg PF
gi|15964269|ref|NP_384622.1| External link sm SF No hits
  sm PF
gi|148252343|ref|YP_001236928.1| External link 42 SF No hits
  42 PF
gi|99080503|ref|YP_612657.1| External link ic SF No hits
  ic PF
gi|90426388|ref|YP_534758.1| External link rg SF No hits
  rg PF
gi|13474699|ref|NP_106268.1| External link mk SF No hits
  mk PF
gi|49473780|ref|YP_031822.1| External link bq SF No hits
  bq PF
gi|121602326|ref|YP_989538.1| External link 4c SF No hits
  4c PF
gi|62289293|ref|YP_221086.1| External link b3 SF No hits
  b3 PF
gi|86747908|ref|YP_484404.1| External link rj SF No hits
  rj PF
gi|119384775|ref|YP_915831.1| External link 27 SF No hits
  27 PF
gi|154250856|ref|YP_001411680.1| External link 1e SF No hits
  1e PF
gi|16125461|ref|NP_420025.1| External link cc SF No hits
  cc PF
gi|49474928|ref|YP_032969.1| External link ho SF No hits
  ho PF