DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: DeoR-like helix-turn-helix domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|26554225|ref|NP_758159.1| External link me SF
  me PF
gi|56964069|ref|YP_175800.1| External link x4 SF
  x4 PF
gi|146296613|ref|YP_001180384.1| External link 1q SF
  1q PF
gi|158320483|ref|YP_001512990.1| External link 68 SF
  68 PF
gi|150390521|ref|YP_001320570.1| External link 0n SF
  0n PF
gi|120602085|ref|YP_966485.1| External link 0t SF
  0t PF
gi|15902497|ref|NP_358047.1| External link st SF
  st PF
gi|182683458|ref|YP_001835205.1| External link 86 SF
  86 PF
gi|145297061|ref|YP_001139882.1| External link 4e SF
  4e PF
gi|157364633|ref|YP_001471400.1| External link 5v SF
  5v PF
gi|169834466|ref|YP_001694013.1| External link 8e SF
  8e PF
gi|86739971|ref|YP_480371.1| External link fk SF
  fk PF
gi|116516738|ref|YP_815966.1| External link 47 SF
  47 PF
gi|116670783|ref|YP_831716.1| External link 1f SF
  1f PF
gi|157150976|ref|YP_001449716.1| External link 6s SF
  6s PF
gi|116492660|ref|YP_804395.1| External link 0d SF
  0d PF
gi|111221443|ref|YP_712237.1| External link 1b SF
  1b PF
gi|15900429|ref|NP_345033.1| External link sr SF
  sr PF
gi|26553523|ref|NP_757457.1| External link me SF
  me PF
gi|119960974|ref|YP_947976.1| External link 56 SF
  56 PF
gi|125718796|ref|YP_001035929.1| External link 5b SF
  5b PF
gi|152967350|ref|YP_001363134.1| External link 58 SF
  58 PF
gi|119386629|ref|YP_917684.1| External link 27 SF
  27 PF
gi|158313943|ref|YP_001506451.1| External link 6p SF
  6p PF
gi|194397298|ref|YP_002037181.1| External link 8z SF
  8z PF
gi|81428849|ref|YP_395849.1| External link ls SF
  ls PF
gi|126465169|ref|YP_001040278.1| External link 0e SF
  0e PF
gi|156936917|ref|YP_001434713.1| External link 63 SF
  63 PF
gi|138894708|ref|YP_001125161.1| External link 1u SF
  1u PF
gi|125973455|ref|YP_001037365.1| External link 4x SF
  4x PF
gi|182436557|ref|YP_001824276.1| External link 7n SF
  7n PF
gi|182434083|ref|YP_001821802.1| External link 7n SF
  7n PF
gi|21219189|ref|NP_624968.1| External link sf SF
  sf PF
gi|119962808|ref|YP_949615.1| External link 56 SF
  56 PF
gi|163839354|ref|YP_001623759.1| External link 7f SF
  7f PF
gi|194451012|ref|YP_002047572.1| External link 9r SF
  9r PF
gi|16762755|ref|NP_458372.1| External link si SF
  si PF
gi|62182047|ref|YP_218464.1| External link x6 SF
  x6 PF
gi|157960839|ref|YP_001500873.1| External link 6t SF
  6t PF
gi|170681818|ref|YP_001743162.1| External link 9t SF
  9t PF
gi|161614204|ref|YP_001588169.1| External link 78 SF
  78 PF
gi|194445840|ref|YP_002042792.1| External link 8y SF
  8y PF
gi|194448714|ref|YP_002045387.1| External link 9r SF
  9r PF
gi|110642174|ref|YP_669904.1| External link 0m SF
  0m PF
gi|16764732|ref|NP_460347.1| External link su SF
Gene name: orf408  su PF
gi|56415447|ref|YP_152522.1| External link x0 SF
  x0 PF
gi|114564568|ref|YP_752082.1| External link 3w SF
  3w PF
gi|194445121|ref|YP_002040636.1| External link 8y SF
  8y PF
gi|161616591|ref|YP_001590556.1| External link 78 SF
  78 PF
gi|29144242|ref|NP_807584.1| External link es SF
  es PF