DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: HTH domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|108761788|ref|YP_635327.1| External link m1 SF
  m1 PF
gi|153011375|ref|YP_001372589.1| External link 40 SF
  40 PF
gi|134296003|ref|YP_001119738.1| External link 30 SF
  30 PF
gi|146319674|ref|YP_001199386.1| External link 4r SF
  4r PF
gi|191637657|ref|YP_001986823.1| External link 95 SF
  95 PF
gi|116494324|ref|YP_806058.1| External link 1o SF
  1o PF
gi|15615737|ref|NP_244041.1| External link bh SF
  bh PF
gi|139473603|ref|YP_001128319.1| External link 4z SF
  4z PF
gi|15900952|ref|NP_345556.1| External link sr SF
  sr PF
gi|116517139|ref|YP_816445.1| External link 47 SF
  47 PF
gi|194398023|ref|YP_002037714.1| External link 8z SF
  8z PF
gi|182684165|ref|YP_001835912.1| External link 86 SF
  86 PF
gi|19746328|ref|NP_607464.1| External link sx SF
  sx PF
gi|169833064|ref|YP_001694510.1| External link 8e SF
  8e PF
gi|15903035|ref|NP_358585.1| External link st SF
  st PF
jgi|Batde5|29046|fgenesh1_pg.C_scaffold_203000001 External link b9 SF
  b9 PF
gi|29144727|ref|NP_808069.1| External link es SF
  es PF
gi|16767694|ref|NP_463309.1| External link su SF
  su PF
gi|56416220|ref|YP_153295.1| External link x0 SF
  x0 PF
gi|62182873|ref|YP_219290.1| External link x6 SF
  x6 PF
gi|126700700|ref|YP_001089597.1| External link 3x SF
  3x PF
gi|16802959|ref|NP_464444.1| External link lm SF
  lm PF
gi|194445445|ref|YP_002043686.1| External link 8y SF
  8y PF
gi|16763248|ref|NP_458865.1| External link si SF
  si PF
gi|51892088|ref|YP_074779.1| External link sb SF
  sb PF
gi|194736571|ref|YP_002117368.1| External link d8 SF
  d8 PF
gi|46907153|ref|YP_013542.1| External link la SF
  la PF
gi|16799990|ref|NP_470258.1| External link li SF
  li PF
gi|161617735|ref|YP_001591700.1| External link 78 SF
  78 PF
gi|194451157|ref|YP_002048471.1| External link 9r SF
  9r PF
gi|116492377|ref|YP_804112.1| External link 0d SF
  0d PF
gi|16763248|ref|NP_458865.1| External link ty SF
  ty PF
gi|15616415|ref|NP_244720.1| External link bh SF
  bh PF
gi|188535042|ref|YP_001908839.1| External link ej SF
  ej PF
gi|152974971|ref|YP_001374488.1| External link 0w SF
  0w PF
gi|148380105|ref|YP_001254646.1| External link 0i SF
  0i PF
gi|52785863|ref|YP_091692.1| External link lc SF
  lc PF
gi|153933769|ref|YP_001384403.1| External link 3t SF
  3t PF
gi|146319730|ref|YP_001199442.1| External link 4r SF
  4r PF
gi|87162111|ref|YP_494752.1| External link a2 SF
  a2 PF
gi|82751754|ref|YP_417495.1| External link sk SF
  sk PF
gi|116874017|ref|YP_850798.1| External link 2g SF
  2g PF
gi|150015224|ref|YP_001307478.1| External link 03 SF
  03 PF
gi|42782040|ref|NP_979287.1| External link bx SF
  bx PF
gi|152975762|ref|YP_001375279.1| External link 0w SF
  0w PF
gi|161510363|ref|YP_001576022.1| External link 6o SF
  6o PF
gi|167038937|ref|YP_001661922.1| External link 8d SF
  8d PF
gi|126700031|ref|YP_001088928.1| External link 3x SF
  3x PF
gi|153936596|ref|YP_001387940.1| External link 2u SF
  2u PF
gi|156932477|ref|YP_001436393.1| External link 69 SF
  69 PF