DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: M protein trans-acting positive regulator (MGA) HTH domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|152977314|ref|YP_001376831.1| External link 0w SF
  0w PF
gi|16128257|ref|NP_414806.1| External link ec SF
Gene name: yagI  ec PF
gi|146310123|ref|YP_001175197.1| External link 08 SF
  08 PF
gi|89107146|ref|AP_000926.1| External link ew SF
  ew PF
gi|52787530|ref|YP_093359.1| External link lc SF
  lc PF
gi|15613431|ref|NP_241734.1| External link bh SF
  bh PF
gi|138896917|ref|YP_001127370.1| External link 1u SF
  1u PF
gi|157694024|ref|YP_001488486.1| External link 6f SF
  6f PF
gi|23100726|ref|NP_694193.1| External link oi SF
  oi PF
gi|154687728|ref|YP_001422889.1| External link 2o SF
  2o PF
gi|16080664|ref|NP_391492.1| External link bs SF
Gene name: ywrC  bs PF
gi|52082140|ref|YP_080931.1| External link lf SF
  lf PF
gi|94989697|ref|YP_597797.1| External link ts SF No hits
  ts PF
gi|76787195|ref|YP_329997.1| External link a9 SF No hits
  a9 PF
gi|46908535|ref|YP_014924.1| External link la SF No hits
  la PF
gi|71902770|ref|YP_279573.1| External link zy SF No hits
  zy PF
gi|139472984|ref|YP_001127699.1| External link 4z SF No hits
  4z PF
gi|94991606|ref|YP_599705.1| External link pp SF No hits
  pp PF
gi|19745363|ref|NP_606499.1| External link sx SF No hits
  sx PF
gi|169833264|ref|YP_001695170.1| External link 8e SF No hits
  8e PF
gi|19746912|ref|NP_608048.1| External link sx SF No hits
  sx PF
gi|16804403|ref|NP_465888.1| External link lm SF No hits
  lm PF
gi|21911264|ref|NP_665532.1| External link s7 SF No hits
  s7 PF
gi|94993577|ref|YP_601675.1| External link tg SF No hits
  tg PF
gi|25011521|ref|NP_735916.1| External link s5 SF No hits
  s5 PF
gi|139473049|ref|YP_001127764.1| External link 4z SF No hits
  4z PF
gi|71910000|ref|YP_281550.1| External link zp SF No hits
  zp PF
gi|182684747|ref|YP_001836494.1| External link 86 SF No hits
  86 PF
gi|94987738|ref|YP_595839.1| External link pk SF No hits
  pk PF
gi|15901629|ref|NP_346233.1| External link sr SF No hits
  sr PF
gi|94989617|ref|YP_597717.1| External link ts SF No hits
  ts PF
gi|21909633|ref|NP_663901.1| External link s7 SF No hits
  s7 PF
gi|94993245|ref|YP_601344.1| External link pp SF No hits
  pp PF
gi|15900377|ref|NP_344981.1| External link sr SF No hits
  sr PF
gi|157150373|ref|YP_001451098.1| External link 6s SF No hits
  6s PF
gi|15674341|ref|NP_268515.1| External link x2 SF No hits
  x2 PF
gi|21909694|ref|NP_663962.1| External link s7 SF No hits
  s7 PF
gi|50915066|ref|YP_061038.1| External link sp SF No hits
  sp PF
gi|15903664|ref|NP_359214.1| External link st SF No hits
  st PF
gi|16801526|ref|NP_471794.1| External link li SF No hits
  li PF
gi|94991295|ref|YP_599395.1| External link ts SF No hits
  ts PF
gi|50913566|ref|YP_059538.1| External link sp SF No hits
  sp PF
gi|94989355|ref|YP_597456.1| External link pk SF No hits
  pk PF
gi|29377474|ref|NP_816628.1| External link ef SF No hits
  ef PF
gi|116516300|ref|YP_817039.1| External link 47 SF No hits
  47 PF
gi|71909920|ref|YP_281470.1| External link zp SF No hits
  zp PF
gi|116516572|ref|YP_816837.1| External link 47 SF No hits
  47 PF
gi|25011468|ref|NP_735863.1| External link s5 SF No hits
  s5 PF
gi|94995207|ref|YP_603305.1| External link tg SF No hits
  tg PF
gi|94987819|ref|YP_595920.1| External link pk SF No hits
  pk PF