DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Genome: Ostreococcus sp. RCC809 Sequence ID: jgi|OstRCC809_1|2208|gw1.10.108.1
Details Genome DB Domain architecture
External link o8 SF
  o8 PF
SUPERFAMILY (SF) domains
Family name Family Regions Evalue
"Winged helix" DNA-binding domain 46785 9-74 1.28e-16
"Winged helix" DNA-binding domain 46785 180-260 1.3e-11
Pfam (PF) domains
Family name Family Regions Evalue
E2F/DP family winged-helix DNA-binding domain E2F_TDP 10-75 1.4e-27
E2F/DP family winged-helix DNA-binding domain E2F_TDP 181-261 3.6e-27

Similar transcription factor domain architectures

The domain architectures on these pages may take several minutes to generate. Please be patient.

Predicted transcription factors with similar SUPERFAMILY domain combinations.
Predicted transcription factors with similar Pfam domain combinations.

DNA-binding domain taxonomic distribution

Links to external data on the distribution of DBDs across the tree of life.

Distribution of "Winged helix" DNA-binding domain DBDs throughout the major taxonomic superkingdoms and kingdoms.
Distribution of E2F/DP family winged-helix DNA-binding domain DBDs throughout the species in UniProt.

Sequence
TTTTRAAYSRKDKSLGLLCENFLARYGDGSTDDVSLDDAATTLGVERRRIYDIVNVLESIDVMVRKAKNQ
YSWHGVRRLPESLKRLKESGLREFGMNFEHEREANKNGSEGNSDNTSLERSEEEESKPMETRNADSDGGA
PGTTGSDKDAVRASSGEQQGAPSNFVGQGRFTVPEAQNDSRREKSLGLLSQKFVQLFLASKLNVVSLDTA
ARILLGDSQDDAKLKTKIRRLYDIANILCSLHLIQKVHLANSRKPAFLWLCRENSIAELIAQGKGLRWFD
KPDADESVHNQKSHVGALGANEETTGAQANGKKQQKRSASKPSSTKPESKRPRGRPRLPGGDGKTVYPHL
PRFDAVIPPERLESFNRLFAFTSVQLAQRYPLDLNTDLQKLIAQTTIGNSNFLHHLAQVSMAQAHAAHQL
MATQTQTPSMTSNAASSVGTDLGAGAAPVVGPLPPFGAVMPVWGMSGMSYQNNSMQEMMQMYENSI