DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Genome: Ostreococcus sp. RCC809 Sequence ID: jgi|OstRCC809_1|48453|estExt_Genewise1Plus.C_130473
Details Genome DB Domain architecture
External link o8 SF
  o8 PF
SUPERFAMILY (SF) domains
Family name Family Regions Evalue
DNA-binding domain 54171 53-101 1.74e-07
DNA-binding domain 54171 141-198 1.52e-10
DNA-binding domain 54171 256-282 7.13e-05
Pfam (PF) domains
Family name Family Regions Evalue
AP2 domain AP2 51-110 7e-06
AP2 domain AP2 141-203 1.6e-15

Similar transcription factor domain architectures

The domain architectures on these pages may take several minutes to generate. Please be patient.

Predicted transcription factors with similar SUPERFAMILY domain combinations.
Predicted transcription factors with similar Pfam domain combinations.

DNA-binding domain taxonomic distribution

Links to external data on the distribution of DBDs across the tree of life.

Distribution of DNA-binding domain DBDs throughout the major taxonomic superkingdoms and kingdoms.
Distribution of AP2 domain DBDs throughout the species in UniProt.

Sequence
MPAPRASTARARSTKRPRSSSSAPGASRAPRPRTAPADPFSRPRADDADGRRFCGVVARPAGRYRAFVWC
DGKTHALGAFDRAEDAAMMHDRARIVIGKETKNFKASRYDASERARWSRDSYTLIDLRREYGAMREGRTH
SEYRGVTKDARTGKYRAEIYSGGESLSVGTYAAEIEAAEAYDRAAITLRGEAATTNFSARKYANDPAMRG
MEGSLDKFRDSLASLKTRKNGGKSTSKHEGVRRYEHRWKNGNVTVKWRAEITVNGKKKQLGYFEKEAEAA
RAVEKFTRDAAA