DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Genome: Ostreococcus sp. RCC809 Sequence ID: jgi|OstRCC809_1|93996|eugene1.0000080048
Details Genome DB Domain architecture
External link o8 SF
  o8 PF
SUPERFAMILY (SF) domains
Family name Family Regions Evalue
Transcriptional factor tubby, C-terminal domain 54518 131-372 9.11e-40
Pfam (PF) domains
Family name Family Regions Evalue
Tub family Tub 149-372 5.9e-16

Similar transcription factor domain architectures

The domain architectures on these pages may take several minutes to generate. Please be patient.

Predicted transcription factors with similar SUPERFAMILY domain combinations.
Predicted transcription factors with similar Pfam domain combinations.

DNA-binding domain taxonomic distribution

Links to external data on the distribution of DBDs across the tree of life.

Distribution of Transcriptional factor tubby, C-terminal domain DBDs throughout the major taxonomic superkingdoms and kingdoms.
Distribution of Tub family DBDs throughout the species in UniProt.

Sequence
MSTVDAGEGRRGRKQASYMKPLSRARGERSGGGREMSGDGEGGPSARSRRRDDGPRTSRVSFVRRRDSAP
VHPSGEDASDDASDGSGGGEGSRSASEGEMRTPSAPPRPRSEESGRARRETRGVMDRVAPLPPWADARAR
RAFTLRALPNDGTHVRCHVLRKPGPFGAFPTYVLYLDGRETTVATLEDAVPILVARKRKKAKCTHYLIGD
DGAERSLNETHASYVGKLKAISSGRRRALAEIRYAVNVLGAGGPRSLAVSLFDSERSAPDDVPTVSHELE
SARPAWNASCRAYVLNFNGRVTRPSVKNFQLVCAAAQDDADVSGDDASHPRVFAQFGRVDDNLFTLDFAH
PLGPLTAFAACLSAFESKFARE